Thursday, 16 January 2014

I think you've had enough, Mr. Bond

James Bond is likely to be impotent, at high risk of liver disease, and the fact he likes his martini "shaken, not stirred" is because of alcohol-induced tremors.

If you weren't already convinced that a real-life James Bond would be a terrible spy - he tells people his actual name for goodness sake - the article Were James Bond’s drinks shaken because of alcohol induced tremor? outlines the likely health issues Britain's most famous fictional spy would be suffering in real life due to his outrageous alcoholism.

The researchers read all 14 James Bond books and noted down each time he had a drink, and how much. They also noted when he was unable to drink - for instance, when incarcerated. Not including the days when he was unable to drink, they found his weekly alcohol consumption to be 92 units (standard drinks in Australia - 10 ml of pure alcohol), over four times the recommended amount. His maximum daily consumption was 49.8 units. Out of the 87.5 days he was able to drink, he only had 12.5 alcohol free days.

This type of behaviour is not consistent with his Lothario character, given that his sexual function is likely to be severely impaired by his drinking. It's also not particularly consistent with his ability to shoot straight outside of the bedroom, where sobriety is a necessity to defeat the bad guys. On the other hand, drinking is likely to have decreased his risk aversion, and previous studies have shown that drinking encourages unsafe sex.

But before you become too crushed by the fact that a fictional hero might not actually be scientifically sound, perhaps Bond is smarter than the authors of this report suspect. A 1999 report Shaken, not stirred: bioanalytical study of the antioxidant activities of martinis found that shaken martinis have superior antioxidant activity and this could have decreased his risk of cataracts and cardiovascular disease. There is hope. I don't feel as bad as I did when I discovered that Santa Claus is a fat, diabetic drunk.

Here's Bond in drinking action in Casino Royale.



And here's a handy infographic:



References:  
Graham Johnson, Indra Neil Guha & Patrick Davies (2013). Were James Bond’s drinks shaken because of alcohol induced tremor? BMJ DOI: 10.1136/bmj.f7255  

Trevithick CC, Chartrand MM, Wahlman J, Rahman F, Hirst M, & Trevithick JR (1999). Shaken, not stirred: bioanalytical study of the antioxidant activities of martinis. BMJ (Clinical research ed.), 319 (7225), 1600-2 PMID: 10600955

Saturday, 28 September 2013

Ep 152: Spiderman Part 2



In part 2 of the Spiderman series, Dr Boob looks at the amazing properties of spider silk and how Peter Parker might harness various technologies to appropriately use it.

It's the final show from Dr Boob for a while and we will miss him greatly! But he's not disappearing completely - show him you care over on twitter - @doctor_boob

Tune in to this episode here.



Cover by Nippoten
Songs in this episode:

Sunday, 15 September 2013

Ep 151: Spiderman Part 1



This is our last Science of superheroes for a while so we thought we'd look at one of the big guys. Over two episodes, Dr Boob examines Spiderman and in episode one, he specifically looks at how to manipulate Peter Parker's DNA using a virus to transport engineered DNA into his cells. It is by changing his genetic structure that we can allow him to have his superhero abilities, which for Spiderman are largely exaggerated spider traits as well as something called a "Spidey sense".

Tune in to this episode here.



Cover image from NanAmy-BoT
Songs in the podcast by:

Saturday, 4 May 2013

Ep 149: Zombies Part 2

In the second of a two part series on zombies, this week we go deeper in the dark world of the undead. In part one we managed, through a combination of drugs, to create zombie-like creatures who were sluggish and largely brain-dead. This week we have a shot at recreating the zombies of films such as I am Legend - creatures created through the transmission of a virus, who are filled with rage and enjoy the taste of brains. Topics covered include:
  1. Mad cow disease and the use of prions to transmit disease,
  2. Chimpanzees who eat brains,
  3. Methamphetamines for the creation of rage,
  4. Mathematical modelling a zombie pandemic and how the zombies could do this sustainably.
Somehow we ended up proposing a "Planet of the zombie apes" movie idea, and a methamphetamine-infused biodome. It might not pass an ethics committee. Tune in to this episode here.



In the podcast we use a few songs, all licensed under a Attribution Noncommercial (3.0)
I As We by Speck
Big John by copperhead 
What It All Boils Down To by texasradiofish
Creative Commons License

Above image from ABC Open Wide Bay

Tuesday, 12 March 2013

Ep 148: Zombies Part 1



Zombies have been fodder for science fiction books and movies for years, but could we actually create one in the lab? And why indeed would you want to do this? Surely the whole "eating brains" concept would mean that making one is probably not in your best interests.

This week on the podcast, Dr Boob takes us on a journey through zombie science fiction, Haitian zombies and zombie-style animals in nature, including a fascinating scenario where ants are hijacked by a fungus. This episode is part 1 - next time we will tackle, among other things, brain parasites, eating brains (cultural, cooking and animals that do it), mad cow disease, the 'zombie' bath salts attacks (face eating), and a mathematical model of a zombie pandemic.

We have looked at zombies in the past. In the post Correlation of the Week: Zombies, Vampires, Democrats and Republicans we looked at how the political party of the US presidency seems to influence the style of science fiction movie made during their presidency. A recent upsurge in zombie films could augur well for the Republicans next time round, although there are still plenty of vampire films and TV shows around.

The song at the end of the podcast is by copperhead / CC BY-NC 3.0

Tune in to this episode here.

Friday, 22 April 2011

Ep 141: Science of Superheroes - Harry Potter


And we're back! It's been a while, but finally it's time for another podcast, so we've made it a long one. Take this episode on a long train ride or car trip, as Dr Boob and I explore the science of the spells of Harry Potter.

Attempting to find scientific and engineering solutions to Harry Potter spells is probably the most difficult task we have set ourselves yet, so we would be very interested to hear how you would made the Harry Potter spells a reality. The spells dealt with in this episode are:
  1. Lumos - Producing light from the end of a wand (A voice activated torch seems a logical solution),
  2. Aguamenti - Shooting water from the end of the wand,
  3. Alohomora - Picking a lock at a distance,
  4. Expecto Patronum - Protection against evil dementors in the form of some virtual creature,
  5. Sectumsempra - Slicing your opponent open,
  6. Aparecium - Reading invisible ink,
  7. Accio - Summoning things to you,
  8. Expelliarmus - Disarming your opposition of their wand,
  9. Confundo - Confusing the victim,
  10. Stupefy - Stunning the victim,
  11. Invisibility cloak - Covering yourself in a cloak to make yourself invisible,
  12. Imperio - Forcing your victims to obey your commands,
  13. Obliviate - Erasing the memories of the victim,
  14. Legilimens - Telepathy.
Although some of these are quite clearly impossible at the moment, in every case we have come up with a scientific or engineering solution to take us at least part of the way there. Listen in to find out what we came up with, and please write in and let us know where we have gone wrong or what you would do.

Click play below or listen to this show here.



References:
  1. Santos, V., Paula, W., & Kalapothakis, E. (2009). Influence of the luminol chemiluminescence reaction on the confirmatory tests for the detection and characterization of bloodstains in forensic analysis Forensic Science International: Genetics Supplement Series, 2 (1), 196-197 DOI: 10.1016/j.fsigss.2009.09.008
  2. A.J. Barnier and D.A. Oakley (2009). Hypnosis and Suggestion Encyclopedia of Consciousness DOI: 10.1016/B978-012373873-8.00038-4
  3. T.C. Jerram (1982). Hypnotics and sedatives Side Effects of Drugs Annual DOI: 10.1016/S0378-6080(82)80009-3
  4. Wood, B. (2009). Metamaterials and invisibility Comptes Rendus Physique, 10 (5), 379-390 DOI: 10.1016/j.crhy.2009.01.002

Wednesday, 21 July 2010

Ep 132: Science of Superheroes - The Hulk

The science of superheroes is taking a green and nasty turn this week as we discuss the largest superhero of them all, The Hulk. Join myself and our regular superhero expert Dr Boob as we delve into the science of how we might realise The Hulk in the lab. It was one of the more entertaining interviews I have done for the podcast.

Listen in to this show here (or press play below), and read further for more info:



The Hulk is alter-ego of Dr Bruce Banner, who allegedly bares a striking resemblance to Dr Boob. Banner is a reserved physicist who involuntarily transforms into The Hulk when triggered by a strong emotion such as anger, fear, terror or grief. The Hulk himself is a massive green monster who gets stronger the angrier he gets. He also has bullet-proof skin.

The Hulk’s origin story includes depends on whether we are looking at the comic book Hulk, the Hulk of the two recent movies, or The Incredible Hulk of the TV series (in which it is David Banner, not Bruce Banner, who metamorphoses into The Hulk).

The 2003 movie version "Hulk" includes many of the topics we discuss in the podcast. The movie starts with genetics researcher David Banner – Bruce Banner’s father - working with the military to "improve" human DNA. The opening credit sequence depicts experiments with jellyfish and starfish DNA, and Banner’s notepad mentions bioluminescence. This suggests that the Hulk gets his green colour from jellyfish DNA as some jellyfish bioluminesce at around 450 nm, which is at the blue/green end of the spectrum. In 1961, Osamu Shimomura extracted green fluorescent protein and another bioluminescent protein, called aequorin, from Aequorea victoria while studying bioluminescence. He eventually received the Nobel prize in Chemistry in 2008 for this work. The mention of starfish is also interesting because, as we found with Wolverine, starfish and sea cucumbers have great healing powers and are able to regenerate lost limbs. Evidently, Banner wanted to splice bioluminescence and improved healing into human DNA.

Banner’s experiments then moved to lizards and monkeys, but unfortunately they all died. Naturally, he then decided if his experiments did not work on animals, he would try them on himself – clearly, ethics committees are not part of superhero science. After conducting experiments on his own DNA, he eventually passes on his mutant DNA to his unborn son Bruce. Once David realises this, he changes his approach and works to cure his son of his genetic afflictions, however the research is shut down and an explosion kills David’s wife. David is taken to a lunatic asylum and Bruce is adopted.

Years later, Bruce has followed his father’s line of work and is conducting military research – Bruce’s area of interest is the use of nanomeds in soldiers. This might include such things as targeted drug delivery for rapid recovery from injury. An experimental accident subjects Bruce to an enormous dose of gamma radiation which “activates” his mutant DNA (possibly combining with the nanomeds) and the building rage/stress transforms him into The Hulk for the first time.

Whether or not this is scientifically possible – well, that’s the topic of the podcast so tune in!

Other issues that we discuss include:
  • Gamma radiation and radiation poisoning;
  • Genetic transfer and gene therapy – could David Banner change his own DNA in such a way that this change would be copied to his progeny? For more information, check out the Weismann Barrier;
  • The Hulk’s size – is it possible to rapidly increase your size? Simple conservation of mass equations would suggest no, and bacteria in a Petri dish generally have a 24 hour doubling time. There are also enormous metabolic requirements involved – we need to have resources available to feed these growing cells and Bruce Banner is not excessively fat. Perhaps to do this we need to accelerate Bruce Banner to the near the speed of light, at which point he may relativistically pick up some mass - however, this is not particularly practical!
  • The Hulk’s strength – is it possible to rapidly increase your strength?
  • The Hulk's healing properties - could we use some of the science of Wolverine here?
  • The materials used to create bullet-proof skin. The toughest skins in the animal kingdom are crocodile, elephant, shark and armadillo; however none are bullet (and knife) proof;
  • What materials could we use to make his "one-size-fits-all" pants? You will notice that no matter what size Bruce Banner or The Hulk are, and no matter what the ripped state of his other clothes, his undies always fit.
  • And of course, whether The Hulk has irritable bowel syndrome and wears giant green snuggies.
    Hope you enjoy this show - we certainly enjoyed recording it, as you will be able to tell by the end! Listen in to this show here (or press play below):



    NB: I've now discovered there's a Red Hulk - future show perhaps?
    Samples in this podcast are broadcast courtesy of ioda PROMONET. They were:

    The Toxic Avenger
    "Superheros 2007" 
    from "Superheroes" 
    Buy at iTunes
    Spaceman
    "Superhero"
    from "Little Baby Souls"
    Buy at iTunes
    Candye Kane
    "Superhero" 
    from "Superhero"  
    Buy at iTunes
    Ninja Kodou
    "Superhero (Psychedelic Man)"
    from "Ninjutsu"  
    Buy at iTunes

    References:
    Shimomura, O., Johnson, F., & Saiga, Y. (1962). Extraction, Purification and Properties of Aequorin, a Bioluminescent Protein from the Luminous Hydromedusan,Aequorea Journal of Cellular and Comparative Physiology, 59 (3), 223-239 DOI: 10.1002/jcp.1030590302

    Moghimi, S. (2005). Nanomedicine: current status and future prospects The FASEB Journal, 19 (3), 311-330 DOI: 10.1096/fj.04-2747rev

    Monday, 12 April 2010

    Ep 126: Science of Superheroes - Doc Ock

    Continuing with our recurring segment The Science of Superheroes, this week we're tackling the mechanically-blessed supervillain Doc Ock, from Marvel Comics. And joining me once again for a journey through superhero scholarship is Dr Boob. To listen to this show, tune in here (or press play below):



    Dr. Otto Gunther Octavius is a scientist who designed a set of advanced mechanical arms to assist him with his nuclear physics research. He controlled the arms via a brain-computer interface. In the movie Spiderman 2, Octavius created the mechanical arms to help him conduct nuclear fusion experiments. The arms had their own artificial intelligence, with an inhibitor chip used such that Octavius could maintain control over them.

    The arms attached to a harness that was strapped around his body. In great comic book tradition, a freak experimental accident caused the limbs to fuse to his body, and the inhibitor chip was destroyed. The arms themselves took control as Octavius could no longer control them, and mad-scientist Octavius became evil Doc Ock. Interestingly, the limbs were able to defend themselves whilst Doc Ock was unconscious, implying not only self-awareness, but a capability to sense their surroundings.

    In this episode, we come closer than we have come before in our series to figuring out a way to recreate a superhero (or supervillain in this case) in the laboratory. The topics discussed in this podcast include:
    • Robotics,
    • The history of artificial limbs,
    • The history of aritifical intelligence, and how to design limbs that could possibly have self-awareness and a desire (and capability) to defend themselves,
    • What is nuclear fusion? Is it possible to develop a controlled energy source using nuclear fusion, and if so, could this be the way forward for powering enormous artificial limbs?
    • What would the limbs be made from? Is it time to turn once again to Adamantium? See our show on Wolverine for more information.
    • Assuming the AI is difficult to accomplish, how could the limbs be controlled? Two methods include:
    1. Myoelectric prostheses - a myoelectric prosthesis uses EMG signals from muscles on the surface of the skin to control the movements of an attached prosthesis. These prostheses have been used where arms and legs have been amputated, with the prosthesis attaching to the residual limb. The concept of neuroplasticity is also very important here. Neuro- (or brain-) plasticity is the ability of the brain to change throughout life, to reorganise itself and form new connections between neurons. Artificial limbs have recently been controlled by chest muscles - this is an example of the brain learning how to control muscles in a completely new way.
    2. Remote control - recent work has shown that objects can be remotely controlled by brain waves (EEG). Naturally, this does not mean one can levitate a chair on the opposite side of the room - the brain needs to be hooked up to a computer which reads the brain signals, interprets them and then controls the connected object in an appropriate way. We discussed this a few years ago in our article Space Invaders Mind Control, Small Testes and Facial Expressions

    To listen to this show, tune in here (or press play below):



    And on the topic of superheroes, you may enjoy this poster from Russell Walks Illustration. It is a Periodic Table of 122 fictitious elements from sci-fi movies, comics, TV series etc. Adamantium is in there, as naturally is the most famous of them all, Kryptonite. Click on the image below for a closer look and to buy the image as a poster.



    Thanks to @markfromhouston for the tip on the Periodic Table poster.

    Saturday, 13 February 2010

    Ep 122: Science of Superheroes - Wolverine (Part 2)

    This is the second part of our series on the science of Wolverine - specifically, how can we create Wolverine in the lab? Join Dr Boob and myself as we journey through Wolverine's characteristics and how they may be recreated in a human. Read more on Wolverine in part 1 of this series. To listen to this show, tune in here (or press play below):



    Specifically in this episode, we tackle the topics of:
    1. What would happen to your bones if you completely covered them with metal? Bones are living parts of your body and make red blood cells, platelets and bone marrow - among other things - that are vital for life.
    2. Would a lack of platelets reduce Wolverine's ability to heal?
    3. Wolverine is likely to be on a cocktail of drugs, including anabolic steroids to beef him up, immunosuppressants so his body doesn't reject the metal coating on his bones, and various drugs to supply red blood cells, bone marrow and platelets.
    4. Could we really harness the healing powers of the sea cucumber for Wolverine, and would they work quickly enough?
    5. Are carrots enough to improve his sight?
    6. What metal could we use to coat his bones? It needs to be able to be injected as a liquid and then harden at body temperature. Most steels have melting points over 1000 degrees Celcius, and this would cause terrible trauma to his body. Dr Boob's suggestion was CerroLOW117, which is 44.7% Bismuth, 22.6% Lead, 8.3% Tin, 5.3% Cadmium and 19.1% Indium. CerroLOW117 has a melting point of 47 degrees Celcius, however lead and cadmium both accumulate in the body and have adverse health effects. It is highly likely CerroLOW117 would not be strong enough to help Wolverine anyway.
    7. And what is a phlebotomist?
    For more on superheroes, check out our recurring science of superheroes series. And for more from Dr Boob, check out Chris's other contributions.

    Monday, 1 February 2010

    Ep 121: Science of Superheroes - Wolverine (Part 1)

    Wolverine is probably the best known of the X-Men. Commonly known as Logan, Wolverine is a mutant who has animal-keen senses, super bodily strength, retracting claws, and the ability to almost instantly heal himself from injury. And thanks to some evil scientists, he has the near indestructible (and fictional) metal alloy adamantium fused to his bones, meaning that his claws and skeleton are almost unbreakable.

    In the second episode of our regular series on the science of superheroes, biochemist Dr Chris Pettigrew (aka Dr Boob) and I discuss where in nature Wolverine's powers can be found, and how we might scientifically create Wolverine in the lab. This is the first of a 2-part show on Wolverine - see below for a brief description of some of the science discussed. Our first superheroes episode was on the science of Wolverine's fellow X-man, and sometime love interest, Mystique.

    To listen to this show, tune in here (or press play below):



    The name Wolverine comes from the Wolverine animal, which lives in isolated northern areas such as the arctic and alpine regions of Alaska. It is a stocky and strong animal that is very strong for its size and has been known to kill prey as large as moose. The wolverine is not actually a bear or a dog, but rather a mustelid, or in common parlance, a weasel.

    While many of Wolverine's powers (such as strength and hearing) could come from its namesake mustelid, if we were to attempt to create Wolverine in the lab, we must first turn to the ocean:

    Healing ability:

    Sea Cucumbers are the champions of organ regrowth. All animals possess some kind of tissue repair mechanism, however the sea cucumber belongs to a group of animals that can regrow lost limbs - salamandas and some starfish also have this ability. The repair process involves cells called morula cells, which move to the point of injury. Although all animals have wound repair processes, not all can regenerate lost body parts. With the sea cucumber, the same processes that repair its injuries also repair limbs and internal organs, and this opens up the possibility that we could one day discover how to repair our own wounds and perhaps how to regenerate body parts. But as Dr Boob says, we are quite some way off from instant healing ability: "The odd bullet to the head won't be able to be dealt with."

    Retractable Claws:

    There is a remarkable analogue found in nature for Wolverine's retractable claws. University of Harvard biologists have determined that some African frogs have the ability to puncture their own skin with sharp bones in their toes. These bones then act as claws to attack predators. The defence mechanism was discovered by David C. Blackburn, James Hanken, and Farish A. Jenkins, Jr. Blackburn said, "It's surprising enough to find a frog with claws. The fact that those claws work by cutting through the skin of the frogs' feet is even more astonishing. These are the only vertebrate claws known to pierce their way to functionality."

    Blackburn discovered the frog and its defences when he was conducting fieldwork in Cameroon and one frog he was studying scratched him. He found 11 frog species in the genera Astylosternus, Trichobatracus and Scotobleps who had this peculiar ability. Read more at Project Frog.

    Smell, sight, hearing

    Whilst there are obvious candidates in nature that have heightened sight, smell and hearing abilities, recent studies suggest that human and dog olfactory receptor genes evolved from a common mammalian ancestor, and as such Dr Boob thinks that mimicking the smelling ability of dogs could be quite "easy." Dogs have an olfactory sense approximately a hundred thousand to a million times more acute than a human's. Scenthounds can smell one- to ten-million times more acutely than a human, and Bloodhounds, ten- to one-hundred-million times more.

    To hear more on the science of Wolverine, tune in here (or press play below):



    Part 2 of this series on the science of Wolverine will be aired over the next few weeks. The song A Russian Peter was used in the background of this podcast, with permission from Ioda Promonet. Buy the full London Philharmonic Orchestra Peter and the Wolf CD, or download individual songs as mp3s, from Amazon here.

    Saturday, 31 October 2009

    Ep 117: Science of Superheroes - Mystique (X-men)

    Ever wondered whether it is scientifically possible to become a superhero?

    In a new series of podcasts, Dr Christopher Pettigrew (aka Dr Boob*) and I are going to tackle this question. Chris is a post-doctoral researcher at the Department of Biochemistry in University College Cork, and in these podcast episodes - which we will publish more than a few times a year - we will uncover whether it is possible now to possess the powers of superheroes, and if we can't, whether in the near future we could engineer ourselves to become superheroes.

    The first superhero we are tackling is Mystique from X-Men. X-men get their powers from an "X gene" that normal humans do not possess, and Mystique is a shapeshifter who naturally looks blue. Actress Rebecca Romijn portrayed Mystique in the X-Men films - I know I clearly remember the blue body-paint...

    Mystique has a number of powers including:
    • The ability to change skin colour;
    • The ability to shape-shift - that is, change form;
    • She can impersonate other voices;
    • She can rapidly grow her hair.
    Within nature, chameleons are able to change their skin colour to match their environment. There are also technologies under current development, such as metamaterials, that can be used to make something look invisible. Through a combination of genetic manipulation to activate melanocytes (and possibly chromatophores), and the use of surface coatings, it is not unforeseeable that we could develop human chameleons. The difficulty here lies in whether we can make a skin colour change a conscious decision - how can you wire up the body such that skin colour responds your thoughts?

    The challenge of being able to impersonate another person's voice should be easy enough to conquer in the near future through a combination of electronics and simple mimicry. It is also possible to foresee rapid hair growth - this could be accomplished by rapid protein synthesis, such as in spider webs.

    The biggest difficulty comes with the shape-shifting - how can one change their 3D shape?

    Tune in to the podcast here (or press play below) to discover what scientific techniques we came up with to tackle the problem of scientifically engineering Mystique:



    A few extra notes to explain some of the random comments in the show:
    Let us know your thoughts on how we could scientifically engineer Mystique. We rated this a 7.5 out of 10 possibly for the next 200 years - if someone really wanted to, notwithstanding the ethical concerns along the way.

    Also let us know which superheroes you would be interested in us tackling.

    * From here on in, Chris will be referred to as Dr Boob - this nickname stems from the fact that Chris's PhD and some of his post-doctoral work has been into the study of breast cancer - yes, someone who is actually changing the world!